You can pick them up with a pteranodon and feed him fish while going to your base. Very easy method

Always use the wyvern cave, you can even use it on foot

Use a wyvern to bite the bee hive, then lure the other bees away and bite them with the wyvern. Use Chile armer and bug repellent to get up close and feed it rare flower, repeat this process

You can absolutely tame them through a wall still. Just finished a 145 tame with mutton, because kibble does not work. Build a 3x1 hallway with no walls on either end, agro run through place a wall in front of it, run around and wall it off. Barely derender, feed through the wall. 21 mutton for a 150, 4.5% per feed. ♡Hz

If you have a squid just grab it and hold it still until it goes unconscious.